Screening and Identification and Structural Analysis of NBS-LRR Family Genes in Ipomoea triloba
CSTR:
Author:
Affiliation:

Clc Number:

Fund Project:

  • Article
  • |
  • Figures
  • |
  • Metrics
  • |
  • Reference
  • |
  • Related
  • |
  • Cited by
  • |
  • Materials
  • |
  • Comments
    Abstract:

    In order to exploit the NBS-LRR resistance genes of Ipomoea triloba, a close wild relative of I. batatas, the genome sequence was screened, identified and analyzed by using pertinent software. The results showed that among the 98 025 genes identified from I. triloba, there are 282 genes encoding NBS-LRR proteins, including 80 N type, 83 NL type, 28 CN type, 57 CNL type, 10 TN type, 23 TNL and 1 RN type. NBS-LRR family genes were located in all of 16 chromosomes, each containing 1 to 65 genes. There were 55 gene clusters in genome of I. triloba, containing 63.5% of the NBS-LRR family genes. There were 7 and 11 conservative domains in CNL and TNL subfamilies, respectively. Therefore, these would provide a scientific reference for utilization of resistance resource in I. triloba.

    Reference
    Related
    Cited by
Get Citation

胡韵卓,石媛媛,黄小芳,毕楚韵,周丽香,梁才晓,黄碧芳,许明,林世强,陈选阳.三裂叶薯NBS-LRR类抗病基因的筛选鉴定与结构分析[J].热带亚热带植物学报,2020,28(5):495~504

Copy
Share
Article Metrics
  • Abstract:
  • PDF:
  • HTML:
  • Cited by:
History
  • Received:December 12,2019
  • Revised:March 09,2020
  • Adopted:
  • Online: September 18,2020
  • Published:
Article QR Code