Transcriptome Analysis of Mesembryanthemum crystallinum under Salt Stress
CSTR:
Author:
Affiliation:

Clc Number:

Fund Project:

  • Article
  • |
  • Figures
  • |
  • Metrics
  • |
  • Reference
  • |
  • Related
  • |
  • Cited by
  • |
  • Materials
  • |
  • Comments
    Abstract:

    In order to understand the salt related genomics in leaves of Mesembryanthemum crystallinum, the expression of transcriptome genes was studied under 400 mmol L-1 NaCl stress by using Illumina Hiseq TM2500 high-throughput sequencing technology. The results showed that there were 13.01 Gb Clean Data from the leaves treated with 400 mmol L-1 NaCl and untreated, the Q30 base was more than 90.08%. Among them, there were 123 differential expression genes (DEGs), including 73 up-regulated genes and 50 down-regulated genes, in which 96 genes were annotated. The eight salt-resistance DEGs of were screened out based on GO, COG and KEGG annotation. The plant hormone metabolism-related genes, including abscisic acid 8'-hydroxylase gene, indole-3-acetamide synthase gene, jasmonate ZIM structure domain protein gene were down-regulated, auxin responsive protein and cytokinin synthase genes were up-regulated. The sugar metabolism-related raffinose synthase genes was up-regulated, and plasma membrane H+-ATPase and dehydrated protein genes were up and down-regulated, respectively. These would provide a foundation for studing on salt tolerance genomics and molecular biology of M. crystallinum.

    Reference
    Related
    Cited by
Get Citation

练冬梅,赖正锋,姚运法,林碧珍,洪建基.冰菜盐胁迫下的转录组分析[J].热带亚热带植物学报,2019,27(3):279~284

Copy
Share
Article Metrics
  • Abstract:
  • PDF:
  • HTML:
  • Cited by:
History
  • Received:July 16,2018
  • Revised:
  • Adopted:
  • Online: May 28,2019
  • Published:
Article QR Code